PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512205.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

YABBY

Protein Properties

Length: 174aa MW: 19291.9 Da PI: 9.6546

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	208.7	2e-64	6	164	5	169
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCntilavsvP + +f++vtvrCGhC++llsvn+ + q+l+ ++ + ++++ + ++++ +s ++++s+ t+++s XP_023512205.1 6 MAAERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASLQVLPPQDSPPGNKQQQVSGGDWSKDRGSSSSSSSSSSKCTKIAS- 99 5789**************************************************97333333333333333333333333333333333333. PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 l ++ +++ r+pp ir +k+qrvPsaynrfikeeiqrika+nPdishreafs+aaknWah+P+i g XP_023512205.1 100 -L-DSAERDQHRIPP-IR--QKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIRCG 164 .3.334455556666.34..6*******************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MSLEMMAAER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCSNLLSVN MGASLQVLPP 60 QDSPPGNKQQ QVSGGDWSKD RGSSSSSSSS SSKCTKIASL DSAERDQHRI PPIRQKKQRV 120 PSAYNRFIKE EIQRIKANNP DISHREAFST AAKNWAHYPH IRCGQKVDGN KQTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	8e-62	YABBY family protein