PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512246.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 233aa    MW: 25706.7 Da    PI: 5.3416
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512246.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.0009293112221
                     EETTTTEEESSHHHHHHHHH CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                     +C+ Cgk+F ++  L  H+r
  XP_023512246.1  93 PCTECGKTFWSWKALFGHMR 112
                     5******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MSTKTTPPPS FYSFTSYSLP IMDSPSRSLF PFTVFPPPSP SHSSLPAPNS RRKRTKFIRP  60
TTAAAAPPLH SPSTPKSKHA KKPDPTAPKI TRPCTECGKT FWSWKALFGH MRCHPERQWR  120
GINPPPNFRR STATDEDHEI AACLIMLANG PNAIDPTEAV TETDGDCREN QESAAAALVF  180
GQRGVKEEEE DDDDDDDDGY LDLNLPPPME DIEEHSSSSY CSGIVLDLRL GPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15178RRKRTKFIRPTTAAAAPPLHSPSTPKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.19e-38C2H2 family protein