PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512254.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 294aa    MW: 32805.6 Da    PI: 6.0611
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.8e-1999149155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r++lg++ taeeAa  +++a+ +l+g
  XP_023512254.1  99 KKFRGVRQRP-WGKWAAEIRDPL----RrVRIWLGTYNTAEEAAMVYDNAAIQLRG 149
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MEGMDLFSSL LVPSVKYSEH RNHTKHFSPP LMAPKLVRIS VTDEDATDSS SDEKEEQHVS  60
RRVKKFITEI TIEALGRRDR KKSTAGKSNL RKPLQPGTKK FRGVRQRPWG KWAAEIRDPL  120
RRVRIWLGTY NTAEEAAMVY DNAAIQLRGP TAQTNFSPPP AVSSSNVSVE ETNDNLSSPT  180
SVLRCPSPST NEKSPETAST GKETRRADSF CSNCDSFYPN DIFDFQPPIP SLFGDTALND  240
AVLRGDYGSS MFINPDDDFG FELGFGFRPS TWHMSENSFQ DISDIFGSDP LVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.12e-50ERF family protein