PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512312.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 343aa    MW: 39124.2 Da    PI: 5.7038
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18163213256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r r +lg+f+tae+Aa a+++ + kl+g+
  XP_023512312.1 163 LYRGVRQRH-WGKWVAEIRLPRN---RNRLWLGTFDTAEDAALAYDREAFKLRGA 213
                     59******9.**********965...48************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MDEGKDTDHD HVRRRQGKLR RPFNNIPDPQ NHHPISHPSF PFFNPPSSVS HASSSSATPL  60
FPFPFQPSQF PHQSKTELVE PVAPVAPVVH HRPSVRPQLT PIASTQHGFG FGYPPYFMGE  120
FASFQQQQQQ HQQFLQHWNE SLNLNTRAAG IRPQVRALNT TKLYRGVRQR HWGKWVAEIR  180
LPRNRNRLWL GTFDTAEDAA LAYDREAFKL RGANARLNFP ELFLNKDNKE EEEEEEASQA  240
PQQDLDNDIE LESNNEAVTE DNIQEAEGVS NSQEMVWREI AEAWLNAMPA GWGPGSPVWD  300
DLDTTNNLLL QPQPSYGSDL QRPPVSPSSS SCPMKPFFHK DED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-48ERF family protein