PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512379.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 240aa    MW: 26922.7 Da    PI: 5.4869
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-1080129355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++  rE+ RRd++N++f eL  +l +    + +K +K+ iL  A++ + +Lq
  XP_023512379.1  80 TSKACREKLRRDKLNERFLELSAVLEPG---KLPKTDKVVILSDAIRMVTDLQ 129
                     67889**********************9...9****************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MDDSAGNWNW LFDYSTMEDL PVVGAPFSPP QSVSFSWSNP SINFPSNKHS LEVDCSYEDL  60
DSLKEVGRKR LKAETSSAST SKACREKLRR DKLNERFLEL SAVLEPGKLP KTDKVVILSD  120
AIRMVTDLQC EIEKLKESED DLKEKIKELK VEKNELRDEK QRLRAEKEKL ELQIKAVNAR  180
AAADIQHPPP TLSAAFTAQG QAAGNKLMPF IGYPGIAMWQ FLPPATVDTS QDHVLRPPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16773GRKRLKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-59bHLH family protein