PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512380.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 224aa    MW: 25018.7 Da    PI: 6.7913
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512380.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-1064113355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++  rE+ RRd++N++f eL  +l +    + +K +K+ iL  A++ + +Lq
  XP_023512380.1  64 TSKACREKLRRDKLNERFLELSAVLEPG---KLPKTDKVVILSDAIRMVTDLQ 113
                     67889**********************9...9****************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEDLPVVGAP FSPPQSVSFS WSNPSINFPS NKHSLEVDCS YEDLDSLKEV GRKRLKAETS  60
SASTSKACRE KLRRDKLNER FLELSAVLEP GKLPKTDKVV ILSDAIRMVT DLQCEIEKLK  120
ESEDDLKEKI KELKVEKNEL RDEKQRLRAE KEKLELQIKA VNARAAADIQ HPPPTLSAAF  180
TAQGQAAGNK LMPFIGYPGI AMWQFLPPAT VDTSQDHVLR PPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15157GRKRLKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-59bHLH family protein