PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512391.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 219aa MW: 24829 Da PI: 11.0834

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.6e-17	31	76	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+q+G+ +W+ Ia+++ gR++k+c++rw++ XP_023512391.1 31 RGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFE-GRSGKSCRLRWYNQ 76 899***************************.**********96 PP
2	Myb_DNA-binding	52.6	1.1e-16	83	126	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ +++G++ W++Iar++ gRt++ +k++++ XP_023512391.1 83 KNPFTEEEEERLLMFQQLHGNK-WALIARHFK-GRTDNAVKNHYHV 126 689*****************.****9.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MMRSRSSSSG GSSGGVGGSG GCGNSSVSCY RGHWRPAEDN KLRQLVEQFG PQNWNYIAEH 60 FEGRSGKSCR LRWYNQLDPN INKNPFTEEE EERLLMFQQL HGNKWALIAR HFKGRTDNAV 120 KNHYHVIMAR RRRERFTIFT NHNNNNILRT RHSLLPFSKV LQSSHQKTAI KWTPLMATTV 180 LRHGGGMSAP TAAVVSGSDG REEQKRRVPF IDFLGMGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33450.1	2e-58	MYB family protein