PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512510.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 254aa MW: 28527 Da PI: 8.8667

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.6	4.9e-32	16	69	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv a++ LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ XP_023512510.1 16 PRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRS 69 8****************************************************7 PP
2	Myb_DNA-binding	48.2	2.6e-15	17	68	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v a++ lGg+ t+k++ + m kg+t ++ks++q+y+ XP_023512510.1 17 RLRWTPELHHCFVLAIQTLGGHhkaTPKLVLQLMDvKGLTISHVKSHLQMYR 68 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MSRNGSVRQY IRSKVPRLRW TPELHHCFVL AIQTLGGHHK ATPKLVLQLM DVKGLTISHV 60 KSHLQMYRST RADMGRQDHK CSSVGRKVSN LEEEDEDGCV EEENVKGGGV IYRSTTTTTT 120 RTSASKRGNR SSRNDGFYGH KEIKMMMIMG DSESHGVALN QSAANHAFFK ISQMMKKEDE 180 EKELSLCLSL QHHCHGSSSE ISEAISSSSS KLDNNHNNNH NNSYRDCSSW SYGRQQQQQI 240 GVNLELSMAL CGSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-31	G2-like family protein