PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512667.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 282aa    MW: 32080 Da    PI: 5.9749
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.41.7e-5081321128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelv +yL++k+++ ++++  +i+e+d+yk++Pw Lp+ + ++ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk++ + 
  XP_023512667.1   8 LPPGFRFHPTDEELVLHYLCRKCSSLPVPA-PIIAEIDLYKYDPWLLPELTVSGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPIGR- 100
                     79**************************99.88***************76678899************************************98. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ g+kk Lvfy g+ap+g+kt+W+mheyrl
  XP_023512667.1 101 -PKTLGIKKALVFYAGKAPRGVKTNWIMHEYRL 132
                     .778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MSVAGVQLPP GFRFHPTDEE LVLHYLCRKC SSLPVPAPII AEIDLYKYDP WLLPELTVSG  60
EKEWYFFSPR DRKYPNGSRP NRSAGTGYWK ATGADKPIGR PKTLGIKKAL VFYAGKAPRG  120
VKTNWIMHEY RLANVDRSAA NKTHNLRLDE WVLCRIYNKK GCIEKHYQST DDFEEEDEKP  180
NISATMPNNN NMVQMDTSYS VPIMHTDSSS GSDPATSPEV TWDKEVQSRP KSGGRGGDID  240
FFEFSYIDSF SAEDNPFGTQ VQFQMDNLSP LQDTFSYLPW QI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-111NAC family protein