PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512706.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 245aa    MW: 27138.6 Da    PI: 7.8695
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71.1e-163280355
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr+++ +g+WvAeI+d       +  r +lg+f taeeAa a+++a++ l+g
  XP_023512706.1 32 FVGVRQRP-SGKWVAEIKDtT-----HdIRMWLGTFKTAEEAATAYDEAARLLRG 80
                    78******.7*********33.....47***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MEGSVKKQQH KEVSVSGSKV GKCKDRSRRR SFVGVRQRPS GKWVAEIKDT THDIRMWLGT  60
FKTAEEAATA YDEAARLLRG ANTRTNFATH LKSTSALSFK IRNLLNQKIS LKRSSSKTSP  120
TKLGPITEIE GAHSGLSCST ATNQEIHKTF DNADWSSACS GEVEVLGLRQ FSHSWWHLPL  180
GLNLEMDEPP DPLLTHQDRQ VAEMSCDSEQ LDLTSIPMCA VNGMSEYLGT TYDAFDSVGQ  240
IFCPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-28ERF family protein