PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512783.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 673aa MW: 73681.2 Da PI: 7.7358

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.5	5.2e-09	405	442	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_023512783.1 405 FEHflHPYPKDSDKIILAKQTGLTRSQVSNWFINARVR 442 554459******************************88 PP
2	BELL	112.3	2.7e-36	269	340	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rq+lq+kkakL+ +l+eV+++Y+qy++q+q+v++ Fe++aglgsak+Y+slAl +iS++FrcLkdai+ qi XP_023512783.1 269 QRQDLQMKKAKLIGMLDEVEQKYRQYHQQMQAVVNCFEQAAGLGSAKSYASLALETISKQFRCLKDAICAQI 340 699********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MATYYHGGSE IQANSDGTHT LYLMNPNYVP YSDTHSQTPP NMLFLNPSGH ALNPSTLPHA 60 PPSNNHFVGI PLSTTDAPRS SYASQSHHEI SALHPMPSQR LHYNLWAPMD QQTHHGISTV 120 SPTTDSTDLC FRRPTTQQGL SLSLSSQQSL YRTLSAEQEI QGGGGAPAIS PTSGDDIRVS 180 GNSPTSVSVV SSGITGVQSV ILGSKYLKAA QELLDEVVNV GKGNYKTDKG DGTKDKMKMK 240 KESTAAIGGE PSGGGETTSK PAAELSTAQR QDLQMKKAKL IGMLDEVEQK YRQYHQQMQA 300 VVNCFEQAAG LGSAKSYASL ALETISKQFR CLKDAICAQI KATGKSLGEE DWLGAKIEGS 360 RLRYVDHHLR QQRALQQLGM IQHNTWRPQR GLPERAVSVL RAWLFEHFLH PYPKDSDKII 420 LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYLEEIKEQE QNGDSHDMLR TNKNEPNKQH 480 GGGGGGGGGG GDQINNNNIK DDHAQSKTEN LMNNQNNIHA SPKKQRTTTV ANNNLETPST 540 KTMLLRDIDT TKHLLQTTAE MNMNHHHYHG GGGGFGAYPV GEIGTRFNSE LLTPRFHGNG 600 VSLTLGLPHS DTQHNYHLGR RLDITNGGGP DFSDINPAPP PPPPPHSAST AYDHVEMQTT 660 KRFAAQLLPD FVA

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MATYYHGGSE IQANSDGTHT LYLMNPNYVP YSDTHSQTPP NMLFLNPSGH ALNPSTLPHA  60
PPSNNHFVGI PLSTTDAPRS SYASQSHHEI SALHPMPSQR LHYNLWAPMD QQTHHGISTV  120
SPTTDSTDLC FRRPTTQQGL SLSLSSQQSL YRTLSAEQEI QGGGGAPAIS PTSGDDIRVS  180
GNSPTSVSVV SSGITGVQSV ILGSKYLKAA QELLDEVVNV GKGNYKTDKG DGTKDKMKMK  240
KESTAAIGGE PSGGGETTSK PAAELSTAQR QDLQMKKAKL IGMLDEVEQK YRQYHQQMQA  300
VVNCFEQAAG LGSAKSYASL ALETISKQFR CLKDAICAQI KATGKSLGEE DWLGAKIEGS  360
RLRYVDHHLR QQRALQQLGM IQHNTWRPQR GLPERAVSVL RAWLFEHFLH PYPKDSDKII  420
LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYLEEIKEQE QNGDSHDMLR TNKNEPNKQH  480
GGGGGGGGGG GDQINNNNIK DDHAQSKTEN LMNNQNNIHA SPKKQRTTTV ANNNLETPST  540
KTMLLRDIDT TKHLLQTTAE MNMNHHHYHG GGGGFGAYPV GEIGTRFNSE LLTPRFHGNG  600
VSLTLGLPHS DTQHNYHLGR RLDITNGGGP DFSDINPAPP PPPPPHSAST AYDHVEMQTT  660
KRFAAQLLPD FVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-116	TALE family protein