PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513094.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 282aa    MW: 31744.7 Da    PI: 8.9718
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.19e-33441871128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 
                     lp+G++F+Ptd+el+ ++L+ kv g +       +   +    +i+   +i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+      
  XP_023513094.1  44 LPAGVKFDPTDQELL-QHLEGKVVGGDahnlhplI---DefipTIQWEqGICYTHPHKLP-GVRKDGVVRHFFHRPSKAYTTGTRKRRKveaeea 133
                     799************.99****9999966664432...143333554447**********.556666688******************8466655 PP

             NAM  78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                         + +W++tgk++ v + +g+++g kk+Lv+y   g+++k+ekt+W+mh+y+l
  XP_023513094.1 134 egEGETRWHKTGKTRGVQV-EGRVKGYKKILVLYsnYGKQKKAEKTNWIMHQYHL 187
                     4433778***********9.999***********6558***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MTQLVDKIND TDRETSVNWS ASCPSCGHQI KTRHKGGIGS LPGLPAGVKF DPTDQELLQH  60
LEGKVVGGDA HNLHPLIDEF IPTIQWEQGI CYTHPHKLPG VRKDGVVRHF FHRPSKAYTT  120
GTRKRRKVEA EEAEGEGETR WHKTGKTRGV QVEGRVKGYK KILVLYSNYG KQKKAEKTNW  180
IMHQYHLGRC EEEKDGEIVV SKVFYQTQPR QCGNSLLQRE SSISLNNPNP NPNPNPNPNP  240
LVDFYNPSFI SFESCDQNRS PTHSHHLVPQ FGVHAGSSSL IS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-102NAC family protein