PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513175.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 288aa    MW: 33524.7 Da    PI: 10.0479
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.13.6e-14301091799
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                      +pkkf+ e+g+k  e+   +++  +g++Wev +  +k++gr+++  GW++Fv+  ++    f+vFk++ r s+f  +v +f+ 
  XP_023513175.1  30 EIPKKFVGEYGLKAFENNPTRVKVADGEEWEVGV--TKRDGRVWFDYGWQKFVEFYNVGLEYFLVFKYELRsSCF--HVVIFDP 109
                     69********9998888899999999********..*********************************666999..9999985 PP
2B363.14.3e-20190281495
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     +  ps+  + + l +p++fae h    ee+ +++l+d++gr+W v++ +y   + ++r+ l++GW++F  +n+Lk+ Df+vF+++++s+++  +k
  XP_023513175.1 190 KIYPSHIQSGAYLNVPRRFAEMHI---EEGAEMVLQDSDGRTWGVTYySYltPQMKRRVELRRGWRKFFVDNDLKVADFCVFEMIRKSSTTIAFK 281
                     56799999999*********9993...24669***************4448644455699***********************997766654443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSKFLQQQLP GMASSSQLCK DPDNPHFFKE IPKKFVGEYG LKAFENNPTR VKVADGEEWE  60
VGVTKRDGRV WFDYGWQKFV EFYNVGLEYF LVFKYELRSS CFHVVIFDPT ATEIKYPLKK  120
KKLKMGTNFD DLHLISHPHP QVGKASFGAM KLMNNRRKLR SMTRTSERAG AMAKATTFQS  180
MTPNPSFMCK IYPSHIQSGA YLNVPRRFAE MHIEEGAEMV LQDSDGRTWG VTYYSYLTPQ  240
MKRRVELRRG WRKFFVDNDL KVADFCVFEM IRKSSTTIAF KVDIFRAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31680.14e-16B3 family protein