PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513200.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 248aa    MW: 27315.1 Da    PI: 9.2487
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51e-20114164256
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+W+AeIrd +     +  r++lg+f+tae Aa+a+++a+++++g+
  XP_023513200.1 114 RYRGVRQRP-WGKWAAEIRDpF-----KaVRVWLGTFDTAEAAARAYDEAALRFRGN 164
                     7********.**********66.....56*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MFITIRAAKV ANSSRDFSDQ NEWLHHPPTL SGLDRDIETS VIVSALTHVV AGEIPIGGES  60
GGPGTLSAGS SSYNSHKRGR QDHRFEEKGR NVVGIYEYER ETRRNIREEE GRRRYRGVRQ  120
RPWGKWAAEI RDPFKAVRVW LGTFDTAEAA ARAYDEAALR FRGNKAKLNF PENVRLRSSL  180
SPATSNQYTM VTDSPMTSSM ISSSSSSAAG LVSSPSVYGS QWGGGYGGDG GFLVPQWPQE  240
VNDNSSPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.11e-16ERF family protein