PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513245.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 690aa MW: 75878.5 Da PI: 6.1657

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	476	513	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_023513245.1 476 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 513 664559******************************88 PP
2	BELL	124	5.9e-40	336	407	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+eVd+rY++y+eq+q+v++sFe+v+glg+a Yt+lA+ka+SrhFrcLkdai++q+ XP_023513245.1 336 DRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFEEVMGLGAAVAYTALAQKAMSRHFRCLKDAIVGQL 407 589******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MGIVAQPLQF LFFTIFLQQF EEFDCDSMSQ QDYQQAAAAA AAAAGFFTPF SNGFDRSSTA 60 HQDPQQHYQH IAHQIRKEKL RLQGFHPPPH PPSLVGIDDD NDDQSAGAAA LHHVYDSAGI 120 LSEMFNFPPA PPPPPPPQTE LYGNREAMNA ADSAVAMQLF LMNPNPRSPS PPPPPPAVSS 180 TLHMLLPNPG SGGSFGQFTW GVVPDQETGD HSSSNPNEGR LSLSLSSSLE AAKAEELRMG 240 DSASGLLYQT HHHPQHVHVG IGSSNPLGVV NLLRNSKYVK AAQELLEEFC SVGRGQFKRN 300 KSNLPSNSNS HGGDGAGVSS SAAKDHQPQP ALSAADRIEH QRRKVKLLSM LDEVDRRYNH 360 YCEQMQMVVN SFEEVMGLGA AVAYTALAQK AMSRHFRCLK DAIVGQLKQS CEMLGDKDGG 420 RASGITKGET PRLKLLEQRL RQQRAFHQMG IMDQEAWRPQ RGLPERSVNI LRAWLFEHFL 480 HPYPSDADKH LLARQTGLSR NQVSNWFINA RVRLWKPMVE EMYQQEAKEE EEDDDDEDNT 540 DEDTKTNPHP ITSNALSQTP TPPSDATPPP PPPPKGLDHT TLSHPPPFSQ NQQYSSQAPP 600 TPSMVANCFP ATHYDSELQD TCRRVSVLTA PDHQFGTTNT SATSDIQGPT TLIRFGTTTG 660 DVSLTLGLRH AGNIPDKNPS FSLRSEFGEC

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MGIVAQPLQF LFFTIFLQQF EEFDCDSMSQ QDYQQAAAAA AAAAGFFTPF SNGFDRSSTA  60
HQDPQQHYQH IAHQIRKEKL RLQGFHPPPH PPSLVGIDDD NDDQSAGAAA LHHVYDSAGI  120
LSEMFNFPPA PPPPPPPQTE LYGNREAMNA ADSAVAMQLF LMNPNPRSPS PPPPPPAVSS  180
TLHMLLPNPG SGGSFGQFTW GVVPDQETGD HSSSNPNEGR LSLSLSSSLE AAKAEELRMG  240
DSASGLLYQT HHHPQHVHVG IGSSNPLGVV NLLRNSKYVK AAQELLEEFC SVGRGQFKRN  300
KSNLPSNSNS HGGDGAGVSS SAAKDHQPQP ALSAADRIEH QRRKVKLLSM LDEVDRRYNH  360
YCEQMQMVVN SFEEVMGLGA AVAYTALAQK AMSRHFRCLK DAIVGQLKQS CEMLGDKDGG  420
RASGITKGET PRLKLLEQRL RQQRAFHQMG IMDQEAWRPQ RGLPERSVNI LRAWLFEHFL  480
HPYPSDADKH LLARQTGLSR NQVSNWFINA RVRLWKPMVE EMYQQEAKEE EEDDDDEDNT  540
DEDTKTNPHP ITSNALSQTP TPPSDATPPP PPPPKGLDHT TLSHPPPFSQ NQQYSSQAPP  600
TPSMVANCFP ATHYDSELQD TCRRVSVLTA PDHQFGTTNT SATSDIQGPT TLIRFGTTTG  660
DVSLTLGLRH AGNIPDKNPS FSLRSEFGEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-131	TALE family protein