PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513248.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

DBB

Protein Properties

Length: 214aa MW: 23266.4 Da PI: 5.8882

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.1	1.3e-06	3	35	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 +C+ ++++e++ fC +++ lC C + H XP_023513248.1 3 IRCDVCNREEASVFCPSDEAALCSACDHHVHCA 35 58**************************99954 PP
2	zf-B_box	23.8	9.5e-08	56	94	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg...Ht 38 +++ C+ ++ ++ lfC +++ lC++C +H g Ht XP_023513248.1 56 SPPSCDICQVRRAFLFCLEDRAILCRECDIPIH-GaseHT 94 5789***999******************9.557765 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MKIRCDVCNR EEASVFCPSD EAALCSACDH HVHCANKLAE KHSRFTLLRS TPTVNSPPSC 60 DICQVRRAFL FCLEDRAILC RECDIPIHGA SEHTQKHSRF LLTGVKVSPS PTTSSSSSSV 120 SGGGDESEEV TIEAEIGIFK TRSRKEAKMG SKGLIRGPVM EDLQPPIVGK FGGMSENGVA 180 FSTSNISEYL ESLPGWCVEE FLDSSCVADV FCKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-55	DBB family protein