PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513372.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 300aa    MW: 34244.9 Da    PI: 5.2645
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.5e-11123166755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + ErrRR r+++++  Lr+l+P+      +K++Ka+i+  Av Y+k+Lq
  XP_023513372.1 123 ISERRRRGRMKEKLYALRSLVPNI-----TKMDKASIVGDAVLYVKELQ 166
                     67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEHVGKHLMM NINEFELQDF IHGDNFDQYV NLIRGGSENP IFDNLDLDFM NVDNRLDPSA  60
EYILDSNIVM NSDPNSLFSS LESFNSIMKE VENEDEDEDD TSVENSSVTT SKKSKVDRSR  120
TLISERRRRG RMKEKLYALR SLVPNITKMD KASIVGDAVL YVKELQVQAK KLKAEISVLE  180
SSINETQTSH RGQNHKKIVQ TSHSGQFLPC KIIQLDVFQV EERGFYLRLV CKMGERVAMS  240
LYKVLESLTS FSIQSSNLAS ASDRFILTAT INVRNCEMDM NLPNLKLWLT GALLNHGFEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.13e-65bHLH family protein