PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513486.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 360aa MW: 40641.5 Da PI: 4.5091

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	128.2	6.2e-40	16	142	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppG+rF Ptdee+v+++Lk+k+ + k++ + ++++d yk+eP++Lp +k+k++++ wyfFs+ k +g ++ r+t++g+Wkatgk+ v+s XP_023513486.1 16 PPGVRFYPTDEEIVMQFLKPKICDPKIQS-DYVTDIDFYKSEPEELPglSKLKNGDRLWYFFSPIVLKFGNGAKSVRTTRHGFWKATGKKVLVKS 109 8************************99.89***********65599999******************************999988 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++vg+++t+vfyk ra+ e+tdWvmhey+l XP_023513486.1 110 -NGRTVGMRRTFVFYKRRASIRERTDWVMHEYTL 142 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MQVFRQSSSY DVNRWPPGVR FYPTDEEIVM QFLKPKICDP KIQSDYVTDI DFYKSEPEEL 60 PGLSKLKNGD RLWYFFSPIV LKFGNGAKSV RTTRHGFWKA TGKKVLVKSN GRTVGMRRTF 120 VFYKRRASIR ERTDWVMHEY TLDEKELKRC PNVQVCYAVC KVREKSGPGP RIGEQYGAPV 180 NDDSVDQVVL VEESEMDSVV LDSQYHSLPR SIETFDSEQQ PSKAPESLNL TESDMSQLPP 240 SQTPNAEFVF NVSELASCSG DGDFLEMADF CGPAACLNTE NPSGSGNLSY EDLNASMDEL 300 DRWHDVETFL KEMGMSLDDL GPSEDDGTVP MAEQNENVNH AANPMDVPLQ SIMKSSSQEK

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MQVFRQSSSY DVNRWPPGVR FYPTDEEIVM QFLKPKICDP KIQSDYVTDI DFYKSEPEEL  60
PGLSKLKNGD RLWYFFSPIV LKFGNGAKSV RTTRHGFWKA TGKKVLVKSN GRTVGMRRTF  120
VFYKRRASIR ERTDWVMHEY TLDEKELKRC PNVQVCYAVC KVREKSGPGP RIGEQYGAPV  180
NDDSVDQVVL VEESEMDSVV LDSQYHSLPR SIETFDSEQQ PSKAPESLNL TESDMSQLPP  240
SQTPNAEFVF NVSELASCSG DGDFLEMADF CGPAACLNTE NPSGSGNLSY EDLNASMDEL  300
DRWHDVETFL KEMGMSLDDL GPSEDDGTVP MAEQNENVNH AANPMDVPLQ SIMKSSSQEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	5e-62	NAC family protein