PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513700.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 236aa MW: 27513.8 Da PI: 9.0065

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104	7.9e-33	98	155	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCts C+vkk+ver+ +dp++v++tYeg+H+h+ XP_023513700.1 98 EDGYRWRKYGQKAVKNSPYPRSYYRCTSVACHVKKRVERCLKDPSIVITTYEGQHTHS 155 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MELDLIWSQF DMFSTSSYPI QNPAIDPENL EILNAWPTSS SQLINDELSE LNLEEEKKPR 60 QKTVKSNHSS KTKKTNQKKK EQEQRYTFMT KSKVDHLEDG YRWRKYGQKA VKNSPYPRSY 120 YRCTSVACHV KKRVERCLKD PSIVITTYEG QHTHSTPVMT RSTFFPPPIS TSLHEGSTSF 180 TTTPPYLFHN QNVHNLNFAR HPNDFVAPSF HHERLPQHTA SFDPFTHLFA STTNYE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	9e-42	WRKY family protein