PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513796.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 228aa    MW: 25871.3 Da    PI: 10.4789
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.41.5e-12109149350
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                      +GV++  k+ +W A I++      +k+++lg+fg+ eeAa ++++a+
  XP_023513796.1 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTFGSQEEAAHLYDRAA 149
                     79**98..47*********4.....5********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVSLRRRRLL GLCAGKSSSV ASLPKFSENG ITPENPSPSS KFVTVHPTSS DDVHITDRSS  60
VVNMESSFAN ALDLTSLKEQ SNQPISGHPL KHRKRHRRKN SHNQELSIMR GVYFKNMKWQ  120
AAIKVDKKQI HLGTFGSQEE AAHLYDRAAF VCGREPNFEL SEEEKQELQK FKWEDFLAMT  180
RHAITNKKHK RLSAGSPTKP GSSSVDDTEF KHRFIGFPVR EDINRSIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.21e-37ERF family protein