PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513922.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 255aa MW: 28974.9 Da PI: 9.5202

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.2	2e-50	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv +yL++kv + +l++ ++i++vd++k++PwdLp + e+e yfFs+r+ ky++g+r+nra++sgyWkatg dk++l++ XP_023513922.1 14 LPPGFRFHPTDEELVLQYLNRKVLSCPLPA-SIIPDVDVCKADPWDLPGN---MEQERYFFSTREAKYPHGNRSNRAAASGYWKATGIDKQILAS 104 79**************************.89***********54...46799******************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++vglkktLvfy+g+ p+g++tdW+mheyrl XP_023513922.1 105 kANQVVGLKKTLVFYRGKPPHGSRTDWIMHEYRL 138 57778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MEKLNFVKNG VLRLPPGFRF HPTDEELVLQ YLNRKVLSCP LPASIIPDVD VCKADPWDLP 60 GNMEQERYFF STREAKYPHG NRSNRAAASG YWKATGIDKQ ILASKANQVV GLKKTLVFYR 120 GKPPHGSRTD WIMHEYRLAS PPMVCFNASQ GKTTLQSCAA PMENWVLCRI FLKKRNGQQS 180 EEEKDAISNR KSRRIGKPVF YEFMRKERGE TDLNLAPSSS SSGSSGLTEI SNNELDDHEE 240 SSSSCNTFPY FRRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-104	NAC family protein