PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513950.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 235aa MW: 26856.8 Da PI: 10.4683

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513950.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.3	1.1e-07	96	141	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +Er RR++ +++++eL ++lP K++K +i+++A + I +L XP_023513950.1 96 RHMLNERMRREKHRQSYSELHSMLPIK-----VKNDKNSIVQMAARTIEEL 141 58889*******************8.....7************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MDDGFPVEFW HTDLYWLDAP IPVSDPAPGQ ISAFVPYLPQ PAIGSRQKNN PITATTITAT 60 YSENVHKRVI EYWRKRWQEK KKPAEMGDLE RERSHRHMLN ERMRREKHRQ SYSELHSMLP 120 IKVKNDKNSI VQMAARTIEE LKASEGMLKK RNIELEMALS AKKRKQEKGT TPIRVAVANP 180 SSGINSMLGV LNLLKTVGVN AKAIHATFLD SQFSTHIAID SHVRSPDSFK FVSNR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	165	KKRNIELEMALSAKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	7e-36	bHLH family protein