PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513951.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 233aa    MW: 26629.5 Da    PI: 10.4119
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.22.2e-0696139454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h  +Er RR++ +++++eL ++lP         ++K +i+++A + I +L
  XP_023513951.1  96 RHMLNERMRREKHRQSYSELHSMLPIK-------NDKNSIVQMAARTIEEL 139
                     58889*********************8.......79999******999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MDDGFPVEFW HTDLYWLDAP IPVSDPAPGQ ISAFVPYLPQ PAIGSRQKNN PITATTITAT  60
YSENVHKRVI EYWRKRWQEK KKPAEMGDLE RERSHRHMLN ERMRREKHRQ SYSELHSMLP  120
IKNDKNSIVQ MAARTIEELK ASEGMLKKRN IELEMALSAK KRKQEKGTTP IRVAVANPSS  180
GINSMLGVLN LLKTVGVNAK AIHATFLDSQ FSTHIAIDSH VRSPDSFKFV SNR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147163KKRNIELEMALSAKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.13e-34bHLH family protein