PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513991.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 250aa MW: 25831.6 Da PI: 10.5046

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.4	2.6e-38	33	126	3	93
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....kaaks 93 +kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ ++s s+ ++ s + ++ +s XP_023513991.1 33 VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFS-SVSLSVRGNGGSTSlsspSSTTS 126 79******************************************************************888.23333333322222322222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MSNSDSGNTN GVSNGAAIDT PKNQPSSNGA LVVKKPPSKD RHSKVDGRGR RIRMPIICAA 60 RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGTGTTPA NFSSVSLSVR GNGGSTSLSS 120 PSSTTSTLSL SRPQALSGPT PFILGKRVRS DDDGGKDDGS GVGPTGPGGY WAVPARPDYG 180 QVWSFAAAAP SEMVVQPGGI SQQASLFAQP QQPIREASAA RVGNYLPSHL NLLASLSGGG 240 GSGRREDDPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	5e-59	TCP family protein