PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514563.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 212aa    MW: 24487.8 Da    PI: 6.795
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-1884134356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  XP_023514563.1  84 YRGVRRRP-WGKYAAEIRDSTR---QgVRVWLGTFDSAEAAALAYDQAAFCMRGA 134
                     9*******.**********322...24**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSLHNHLFGY QENFENFPGK QNSHLSFHFN YLEEMLFADM SLSSSSSSSD SSPCLSPEMH  60
VKEEIEDGDI VVQEDRTPKE ERAYRGVRRR PWGKYAAEIR DSTRQGVRVW LGTFDSAEAA  120
ALAYDQAAFC MRGALATLNF PVEVVRESLY EMKYRWEVGC SPVLALKRRH TIRRKKMAEA  180
EKMEKKMKKK KNVVVFEDLG VEYLEELLSL TS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173191RRKKMAEAEKMEKKMKKKK
2174192RRKKMAEAEKMEKKMKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-47ERF family protein