PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514576.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 244aa    MW: 27532.7 Da    PI: 10.4807
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-2076125255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f+tae Aa a+++a+++++g
  XP_023514576.1  76 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEAAAIAYDNAALRFKG 125
                     7********.**********9...3.35************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MESAHFRGKH RRRKKKGIKM IWVLLISLKI KRRKVDRRHG KRPLPWEAPA EEEERDQNDL  60
GSSNFSQNQE SGRKRHYRGV RQRPWGKWAA EIRDPNKAAR VWLGTFDTAE AAAIAYDNAA  120
LRFKGNKAKL NFPERLQPNP PHSAFLPPAG AAASSAPLAP TPPAPSLPPS HEEAFPGLHQ  180
YAQLLSSTDA DFPYYSSTLL NQPHHYPLYS SSSSSSSQHH HQQQQQHHDQ DQYGKDFGPG  240
GSTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11134RRRKKKGIKMIWVLLISLKIKRRK
21235RRRKKKGIKMIWVLLISLKIKRRK
31336RRRKKKGIKMIWVLLISLKIKRRK
41437RRRKKKGIKMIWVLLISLKIKRRK
53142KRRKVDRRHGKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.16e-31ERF family protein