PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514639.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 233aa    MW: 25974.2 Da    PI: 5.9313
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.82.1e-2170119356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a+++a+k+++ge
  XP_023514639.1  70 YRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDEAAKRIRGE 119
                     9*******.**********94....35**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MCGGALISGI IEKKRGRKYS NGSLWPDTDH FSDLLGLDYC ALKTETSQKE CRATAVPEPE  60
KTRKARKNIY RGIRQRPWGK WAAEIRDPQK GVRVWLGTFN TAEEAARAYD EAAKRIRGEK  120
AKLNFAPRPQ PLPVSQPPAK KRCVAHELTS DCFSSTSSAP TPAPASTRVN NSCEIDGLYY  180
GEELASLRSF LDLDFEEEQQ PSQVGGSDEF GQAVELWMMD DPSLNEEKFG EVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-42ERF family protein