PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514693.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 96aa    MW: 10788.3 Da    PI: 10.6628
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.96.6e-0722641555
                    HHHHHHHHHHCTSCC.C....TTS-STCHHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPk.as.kapskKlsKaeiLekAveYIksLq 55
                    +i + +++L +l+P+ +  + +s  +s + iL++++++I+sL+
  XP_023514693.1 22 QIADLISKLHRLIPQiRNrRSSSSTVSASKILQETCNFIRSLE 64
                    899************9886666666****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MSTRTPRSRR SPLPSTTISD HQIADLISKL HRLIPQIRNR RSSSSTVSAS KILQETCNFI  60
RSLEREVDDL SERLSELLAS TDPESAQAAI LRSLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-28bHLH family protein