PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514722.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HD-ZIP
Protein Properties Length: 839aa    MW: 90383.8 Da    PI: 6.1443
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-20133188156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe++F+++++p++++r eL+++l L++rqVk+WFqNrR+++k
  XP_023514722.1 133 KKRYHRHTPQQIQELESVFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 188
                     688999***********************************************999 PP
2START205.42.2e-643415661206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+ +ep+W  s     e++n++e++++f++  +     + +ea+r++g+v+ ++  lve+l+d + +W e+++    + +t+
  XP_023514722.1 341 ELALAAMDELVKMAQTDEPLWIGSLeggrEILNQEEYMRTFTPCIGmkpngFVTEASRETGMVIINSLALVETLMDAN-RWAEMFPcmiaRTTTT 434
                     5899**************************************9988999*9***************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwveh 169
                     +vissg      galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vd Svd  ++ p+  ss++ +++lpSg+++++++ng+ kvtwveh
  XP_023514722.1 435 DVISSGmggtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDLSVDAMRETPTsGSSFINCRRLPSGCVVQDMPNGKKKVTWVEH 529
                     ************************************************************9999******************************* PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++++++h+l+r+l++sg+ +ga++wvatlqrqce+
  XP_023514722.1 530 AEYDDSQVHQLYRPLLSSGMGFGAQRWVATLQRQCEC 566
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MSFGGFLDGG GGGSGGARIV ADLSYVNNNT TASNNNPTGG IPGGGIMPSG AVAPPRLITQ  60
SLTKSMFNSP GLSLALTNMD GGQGDLAARL PEGFEHNVGR RGRDEEHESR SGSDNMDGGS  120
GDDQDAADNP PRKKRYHRHT PQQIQELESV FKECPHPDEK QRLELSRRLC LETRQVKFWF  180
QNRRTQMKTQ LERHENTLLR QENDKLRAEN MSIRDAMRNP ICSNCGGPAI IGEISLEEQQ  240
LRIENARLKD ELDRVCTLAG KFLGRPISSL ANSIAPPLPS SSLELGVGSN GFGSLTMATS  300
MPIGPDFGGG LSGNLSVVQP PVRPTPGMGL DRSVERSMLL ELALAAMDEL VKMAQTDEPL  360
WIGSLEGGRE ILNQEEYMRT FTPCIGMKPN GFVTEASRET GMVIINSLAL VETLMDANRW  420
AEMFPCMIAR TTTTDVISSG MGGTRNGALQ LMHAELQVLS PLVPVREVNF LRFCKQHAEG  480
VWAVVDLSVD AMRETPTSGS SFINCRRLPS GCVVQDMPNG KKKVTWVEHA EYDDSQVHQL  540
YRPLLSSGMG FGAQRWVATL QRQCECLAIL MSSAVPVRDH TAITAGGRRS MLKLAQRMTA  600
NFCAGVCAST VHKWNKLNAG SVDEDVRVMT RKSVDDPGEP PGIVLSAATS VWLPLSPQRL  660
FDFLRDERLR SEWDILSNGG PMQEMAHIAK GQDHGNCVSL LRASAMNANQ SSMLILQETC  720
IDAAGSLVVY APVDIPAMHV VMNGGDSAYV ALLPSGFAIV PDGAVSRGLT TTNGSSPSGG  780
DGPQSQRVTG GGGSLLTVAF QILVNSLPTA KLTVESVETV NNLISCTVQK IKAALQCET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein