PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514723.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 406aa    MW: 44540.2 Da    PI: 7.2983
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.9e-19225274356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+ta eAa a++ a+  l+ge
  XP_023514723.1 225 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAVEAAIAYDTAAYMLRGE 274
                     8******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MADQFPLIEE LKNIIPKDIS SSSPSSFEEF VSGYYFHGDP ILWSSIARAS CSENGDSNGN  60
DQSKSPSSSS SSSSSFRLFS SEKSEISGGN LIENFRGIRK FESNLHPDGD GFVPVNFLEA  120
SPTLFQSRTD STNLTLFLQE SAIVDPSPRN PFQIQAQNGL QWLKNNHNQS QAAAIAAVSS  180
RNYSDFWLGA TKTQPMKQSG RKQGSHKTES TATATATATA VGKLFRGVRQ RHWGKWVAEI  240
RLPRNRTRVW LGTFDTAVEA AIAYDTAAYM LRGEFAHLNF PDQKHRLKSN SLNRTTAALL  300
EAKLKTISQE NTSRKKTATS STIAATTTIP TIDSSSSEKR SNLSQNPTRI SPENMSGNGG  360
NNGGSETGEL KRNPDEIFEI EQHLQLSTTP SLDMDTIWDA LLVSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.16e-55ERF family protein