PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514890.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 236aa    MW: 26068 Da    PI: 8.997
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1222.1e-382685362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    ++ ++cprC+s+ntkfCyynnysl qPryfCk+CrryWt+GG+lrnvPvGgg+rk++ks+
  XP_023514890.1 26 KELRSCPRCKSNNTKFCYYNNYSLMQPRYFCKSCRRYWTEGGSLRNVPVGGGSRKSRKST 85
                    67899***************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MNQKINPNPS SRSSSLSLSS SREAPKELRS CPRCKSNNTK FCYYNNYSLM QPRYFCKSCR  60
RYWTEGGSLR NVPVGGGSRK SRKSTTTTTM SCSSSSSSSD HFKNKPRLPN YPSSQDLNVA  120
FPCAMTHFVE VPKVVENMKN DGFRGLSSFI PNLMPNSNNI DADLGYHSLP LHEFKPSLGI  180
NCVDGFGSGP NLVGFQQLNQ NSCGEPNECD DHQKERQQGN NISSGFWSGM LGGGSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.23e-33Dof family protein