PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514974.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 360aa    MW: 41164.2 Da    PI: 6.3907
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514974.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.15.4e-31103206198
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    +  + ++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_023514974.1 103 FDKVVTPSDVGKLNRLVIPKQHAEKYfplnSTTNDKGLILNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFQRGvGDfAK 197
                     89*************************998434447789************************************************65577777 PP

                     E..EEEEE- CS
              B3  90 felvvkvfr 98 
                      +l++ ++ 
  XP_023514974.1 198 DRLFIDWRH 206
                     778887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MDFLTKSKQE EEEEEEEEEE EEEEEEEEEI PTVACDFFTN SHSQNHHHCL QHPPNHSQNQ  60
HPPNHSQNQH PPNHSQNQHP PMDLSLRIDS NNNGFAVERE HMFDKVVTPS DVGKLNRLVI  120
PKQHAEKYFP LNSTTNDKGL ILNFEDRNGK PWRFRYSYWN SSQSYVMTKG WSRFVKDKKL  180
DAGDVVSFQR GVGDFAKDRL FIDWRHRSDT SRPHPLLLLP QSLRWASDRH FTTLPPPPPL  240
QPRRTHHHLY PNYALQMSNL GMGSHGSNNN SSMYYFQPSI SSSTSSSLYR MRNGDGIVVN  300
NEGSSMGINK GGSGGTTPKR LRLFGVNMEC AAADGEGEHD VPNGGVSRRG KEPLSLNWDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.11e-62B3 family protein