PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514993.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 217aa    MW: 24037.1 Da    PI: 4.8517
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83e-194898155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + ++GVr ++ +g+Wv+eIr p++   + r++lg+f t+e+Aa+a++aa+++++g
  XP_023514993.1 48 PVFRGVRKRS-WGKWVSEIRQPRK---KSRIWLGTFPTPEMAARAHDAAALCIKG 98
                    579****888.**********843...6***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MAKPKSSFPT TPPPLSSSFP STRPVSGAGP AQPDPPPRKR TRDCNRHPVF RGVRKRSWGK  60
WVSEIRQPRK KSRIWLGTFP TPEMAARAHD AAALCIKGDS AILNYPELAS FLPRPASLMP  120
HDIQAAAAKA AAMATALPSP SEEEEEEELS EIVELPNIED DFGTESLNEF KLVTESWEWW  180
EYVAMPLAAE FGGCSFSDQW AAEDSIFPCS FYGALWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-45ERF family protein