PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023515034.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

ARR-B

Protein Properties

Length: 384aa MW: 43932.4 Da PI: 7.0245

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023515034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	75.8	5.7e-24	194	247	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l Wt++LH+ F++a+e L G +kA Pk+il+lm+v+gL e+v SHLQk+R XP_023515034.1 194 KPKLIWTQQLHKTFLQAIEAL-GVDKAHPKEILQLMNVPGLRKENVSSHLQKFRF 247 79*****************.******************************6 PP
2	Myb_DNA-binding	30.5	8.5e-10	197	246	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + WT+++++ +++a++ lG + ++k I + m+ g+ +++ s++qk++ XP_023515034.1 197 LIWTQQLHKTFLQAIEALGVDkaHPKEILQLMNvPGLRKENVSSHLQKFR 246 56**********************************************97 PP
3	Response_reg	57.7	6.7e-20	15	123	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + ++++ ++l gy e+ +a+ + +al+++ke++ ++lil+D +p+m +ell++i e+ ++lpi+++t+ ++e l +l G XP_023515034.1 15 VLVVDHDSTTLKIVSKMLGVCGY-EAVTAKCAIDALRIVKERKndIHLILTDTHLPDMGRYELLEKIMEQTSTLPIVAMTTDDNEIVKLGCLFKG 108 89*******************.9999*******887777******************99999******************* PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a+ +l+Kp ++++ XP_023515034.1 109 AMLCLVKPLTMKNIK 123 ******9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGVCGYEAV TAKCAIDALR IVKERKNDIH 60 LILTDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK 120 NIKDLWQFLF IGGRERSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEEVSTR 180 QVEGDGSEST GPKKPKLIWT QQLHKTFLQA IEALGVDKAH PKEILQLMNV PGLRKENVSS 240 HLQKFRFSLK RGQDVKKKTF ESFETAQIPN HRTKLPINVD IFVAKPQETQ PQLCNNLSST 300 SINSNLMGSC DVVSSESCFS KVITSQTCSM NSTQRRSLED QERRQWFECN RKEMTSTMVE 360 EQGHCMFTVD EELDGVLDVH DLLF

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGVCGYEAV TAKCAIDALR IVKERKNDIH  60
LILTDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK  120
NIKDLWQFLF IGGRERSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEEVSTR  180
QVEGDGSEST GPKKPKLIWT QQLHKTFLQA IEALGVDKAH PKEILQLMNV PGLRKENVSS  240
HLQKFRFSLK RGQDVKKKTF ESFETAQIPN HRTKLPINVD IFVAKPQETQ PQLCNNLSST  300
SINSNLMGSC DVVSSESCFS KVITSQTCSM NSTQRRSLED QERRQWFECN RKEMTSTMVE  360
EQGHCMFTVD EELDGVLDVH DLLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-44	ARR-B family protein