PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515081.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 145aa    MW: 16038.3 Da    PI: 5.2996
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-201869256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+G+r+++ +g+++AeIrdps ng  +r +lg+f+taeeAa+a+++a+ +++g+
  XP_023515081.1 18 RYRGIRRRP-WGKFAAEIRDPSRNG--ARLWLGTFDTAEEAARAYDQAAYAFRGH 69
                    69*******.**********98887..*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MEGKRPTNER KKSPNEARYR GIRRRPWGKF AAEIRDPSRN GARLWLGTFD TAEEAARAYD  60
QAAYAFRGHL AILNFPNEYQ SGNPNSEAAF GGSTAAPSSS TAFSGNYSGS NGSHGSNDVI  120
ELEYLDNEVL EELLQSDDEG FNRKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-32ERF family protein