PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515152.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 198aa    MW: 21956.1 Da    PI: 6.6359
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-1852101255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr++  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++aa+++++g
  XP_023515152.1  52 KYRGVRRRA-WGKWVSEIREPRK---KSRIWLGTYSTAEMAARAHDAAALAIKG 101
                     8*****777.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MNTNSHHSQP TTTSSASSSA SSSGENRRKR PRGTTTTSNI ESESESSHST RKYRGVRRRA  60
WGKWVSEIRE PRKKSRIWLG TYSTAEMAAR AHDAAALAIK GCGAFLNFPE LKHQLPRPAS  120
LSAKDIQAAA ADAATLKPPM AEEEEEEEEE ETWFDLPDLV VGGSDGLLLA RYDSPWQFGG  180
DQQTSWHWDS YSHTILPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.11e-23ERF family protein