PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515159.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 388aa    MW: 43164.6 Da    PI: 4.8596
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.6e-19114163255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a++a +++++g
  XP_023515159.1 114 QYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDAEARRIRG 163
                     69*******.**********94....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MCGGALISGF IPTTRSRRVT GEHLWPNLNK PGFGSQLSKP VKSSIVDIDD DFEADFQHFK  60
DESDLELDDG ELVDVKPFAF SAGRNPSVPS ARASKSVEFS GQAEKSSKRK RKNQYRGIRQ  120
RPWGKWAAEI RDPQKGVRVW LGTFNTAEEA ARAYDAEARR IRGKKAKVNF PNEAPQTSGK  180
RSAKTNLQEP LAKTSLTRTQ PNLIQNNDFV NSSDEEYYRT MGFLEEKPLA NQLVNMNSFH  240
ANGDVAIKTS PPSSDVSPMY FNSDQGSNSF DYSDFGWGEQ GAKTPEISST LSAAMENQES  300
YFVESASPRK KVKYSSENMV PQGSEKTLSE ELSSFESEMK NFQMPYLDGG WDTSMDAFLA  360
GETGNQDGEN SVDLWTFDDL TAMISSVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.36e-84ERF family protein