PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515220.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 324aa    MW: 36400.9 Da    PI: 7.8309
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.11.2e-32163218258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR+RgsgGrF
  XP_023515220.1 163 EPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHLHAMRRARGSGGRF 218
                     8****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MFFPLGWQNK FQTMPSKPGI VEQEAADGAK YLLQSTKYSE PWWHGVGNNT ITDEDATKTS  60
SAEYLNVTVT SAAMLSQAND ENTGQEVQHL KYIPFSTSPP VGERLDPNSQ MELVGHSIVL  120
TSYPFSDAQC CQMLTSYGPQ TTLPHFYGLH HARMPLPLEM EAEPVYVNAK QYHGILRRRQ  180
SRAKAELEKK VIKSRKPYLH ESRHLHAMRR ARGSGGRFLN TKKPNSVISN KTMEEDINSS  240
INHVSEPVSE GRSNYMVANE NGMKDTLDDQ QKEDKEFMPQ NMQITHAFFN GGKSNGHGLS  300
TYNSKLADES IQVNAAPQRA IPIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.12e-41NF-YA family protein