PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515291.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 263aa    MW: 29410.1 Da    PI: 8.3445
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.00021531911255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +++ +      +K + a++L +A+ YI+ Lq
  XP_023515291.1 153 RKEKLVDRITALHQIVSPF-----GKTDTASVLSEAIGYIRFLQ 191
                     6677778899999999887.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MMAGNPNWWG MFSPSFSSFA EQPQSWSQLL LGEEERVLNQ TQMGHYQPKK LENWEHQILD  60
HTTTTNPSPP PPPNFVDIVK QEFSNTNKFL NFSSHNTNFP DLTHNQPAHH LPEVRFSCKS  120
FEQSNHIAPV SGSACKKARI HPPSSSQPPL KVRKEKLVDR ITALHQIVSP FGKTDTASVL  180
SEAIGYIRFL QGQIEALSYP YLRSAPKHVR DSGSGGEEMR REEKAVKELR SRGLCLVPVS  240
CTQLVGGDNN GAAYWAPAYG NGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.18e-46bHLH family protein