PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023515323.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 562aa MW: 62906.2 Da PI: 4.604

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023515323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.9	7e-52	16	142	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdee++ +yLk+k+ g++++l +++ ++d+yk+eP++Lp +k+k+++++w+fFs+rd+ky++g r+nrat++gyWkatgkd++v++ XP_023515323.1 16 PPGFRFHPTDEEIILYYLKRKICGRRIKL-DIVGDIDVYKWEPEELPglSKLKTGDRQWFFFSPRDRKYPHGARSNRATRHGYWKATGKDRTVTC 109 9**************************.99***********6559999************************************* PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktL+fy+grap+ge+tdWvmhey++ XP_023515323.1 110 -NSRDVGVKKTLIFYRGRAPSGERTDWVMHEYTM 142 .999**************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MELLSRSSAG EDNGFPPGFR FHPTDEEIIL YYLKRKICGR RIKLDIVGDI DVYKWEPEEL 60 PGLSKLKTGD RQWFFFSPRD RKYPHGARSN RATRHGYWKA TGKDRTVTCN SRDVGVKKTL 120 IFYRGRAPSG ERTDWVMHEY TMTEEELGRC INVKNYYAVY KVFKKSGPGP KNGEQYGAPF 180 KEEDWVDDEF CDFNFDDKEK PAEKPNTDTT ATESENRHMT HLSLDDLDMF MIQLSNEPLL 240 EFPEADPCAN SLPQDGRQEE SGCPVVDLCL QEHNLPRSVE LSSSEQQPSN VPESIDLTKS 300 DRPFQTPEAK SSPNLSELTS FLFEDDFLEI DDLGGPEFNL STTEKGSGTG NLQFEELNGL 360 CNLDQFHDAA MFLNDMGPLE YGTIPNLFQN ENVDILASPL DVQFQSNPNC ASANQIDNQM 420 LIPDLALQDG FALSELPQTS GVLCDPSNQN EVGKDVSSAS RVSSALWAFV ESIPSTPASA 480 AENGLVNRSF DRISSFGRKR VSTNSTMVSA IDSSSIIVSS SRRTASRSRK GGFFVFSVLG 540 ALCAILWVFI GAVRLWHRCI SL

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MELLSRSSAG EDNGFPPGFR FHPTDEEIIL YYLKRKICGR RIKLDIVGDI DVYKWEPEEL  60
PGLSKLKTGD RQWFFFSPRD RKYPHGARSN RATRHGYWKA TGKDRTVTCN SRDVGVKKTL  120
IFYRGRAPSG ERTDWVMHEY TMTEEELGRC INVKNYYAVY KVFKKSGPGP KNGEQYGAPF  180
KEEDWVDDEF CDFNFDDKEK PAEKPNTDTT ATESENRHMT HLSLDDLDMF MIQLSNEPLL  240
EFPEADPCAN SLPQDGRQEE SGCPVVDLCL QEHNLPRSVE LSSSEQQPSN VPESIDLTKS  300
DRPFQTPEAK SSPNLSELTS FLFEDDFLEI DDLGGPEFNL STTEKGSGTG NLQFEELNGL  360
CNLDQFHDAA MFLNDMGPLE YGTIPNLFQN ENVDILASPL DVQFQSNPNC ASANQIDNQM  420
LIPDLALQDG FALSELPQTS GVLCDPSNQN EVGKDVSSAS RVSSALWAFV ESIPSTPASA  480
AENGLVNRSF DRISSFGRKR VSTNSTMVSA IDSSSIIVSS SRRTASRSRK GGFFVFSVLG  540
ALCAILWVFI GAVRLWHRCI SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-131	NAC family protein