PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515836.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 244aa    MW: 27522.4 Da    PI: 5.9377
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.55.9e-145297454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ++ + Er+RR+++N++++ Lr+++P+      +K++Ka+i + A++YI++L
  XP_023515836.1 52 KNIASERNRRRKLNERLFALRSVVPNI-----TKMDKASIIKDAIDYIQNL 97
                    56688*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDSFGNDCMN YFGSDIFIPT EELDSWGFDE PVSGYYDSSS PEGVLSSSSA TKNIASERNR  60
RRKLNERLFA LRSVVPNITK MDKASIIKDA IDYIQNLHEQ ERRVQTEISE LESGKFKITG  120
CEFDQEIPLL LRPKRKKTEK YFSYGSPASR TSPIEVQDLS VTYMGGRTLA VSMTCCKRAD  180
SMVKLCEVFE SLKLKIITAN ISAVSGRLLK TVFIEAEKEE RDYLKIKIET AIAGLNDPHS  240
PMSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133139PKRKKTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.19e-64bHLH family protein