PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515932.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family BBR-BPC
Protein Properties Length: 277aa    MW: 30932.5 Da    PI: 10.4082
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind302.51.6e-9212771301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     md d+ + rn+gyyep+   k +l lqlms+i e+d k     r+  + +++ ++++++r           ++  rd ++++        ++kll
  XP_023515932.1   1 MDGDALNMRNWGYYEPS--GKAQLRLQLMSTIFEQDMKHflpgRNPSA-MINMNGVFHSRGsgvsepsvpTNW-VRDGWINH-------NRDKLL 84 
                     99999988*******99..556689*************9999666655.************999999987777.89999998.......678999 PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+ + s        +++  +t+ ++ +q+    q +d++++  e+    +   +  ++++ke+k+ kkrq++  pk++k kk++k       k
  XP_023515932.1  85 NMLPPNPS--------YSTHAETSAAQPVQM---LQAHDTSID--EM----VG--RIDEPSEKESKQLKKRQNGGAPKVPKPKKPRK------AK 154
                     99996554........556678888888888...455555555..22....22..33457889999999****************99......22 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++ +s+ +++ka+kk++dlv+ng ++D+s++P+P+CsCtG+++qCY+WG GGWqSaCCttt+Sv+PLP+s krrgaRiagrKmS gafkk+LekL
  XP_023515932.1 155 NNDPSV-QQVKAPKKKMDLVINGLDMDISGIPIPICSCTGTPHQCYRWGYGGWQSACCTTTLSVHPLPMSEKRRGARIAGRKMSLGAFKKVLEKL 248
                     334443.579************************************************************************************* PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     a++Gy++snp+DL++hWA+HGtnkfvti+
  XP_023515932.1 249 AGQGYNFSNPIDLRSHWARHGTNKFVTIK 277
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDGDALNMRN WGYYEPSGKA QLRLQLMSTI FEQDMKHFLP GRNPSAMINM NGVFHSRGSG  60
VSEPSVPTNW VRDGWINHNR DKLLNMLPPN PSYSTHAETS AAQPVQMLQA HDTSIDEMVG  120
RIDEPSEKES KQLKKRQNGG APKVPKPKKP RKAKNNDPSV QQVKAPKKKM DLVINGLDMD  180
ISGIPIPICS CTGTPHQCYR WGYGGWQSAC CTTTLSVHPL PMSEKRRGAR IAGRKMSLGA  240
FKKVLEKLAG QGYNFSNPID LRSHWARHGT NKFVTIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.15e-93BBR-BPC family protein