PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516296.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 254aa    MW: 27756.7 Da    PI: 5.1232
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.6e-1768117255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  XP_023516296.1  68 LFRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALTIKG 117
                     59****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MPLLIENDST TFSFSSPSPS PSPSPSPSSS GSLSTVLLGE SDQSGTAVDS NRKRAKRPRD  60
NSNTKHPLFR GVRMRAWGKW VSEIREPRKK SRIWLGTFST PEMAARAHDV AALTIKGNSA  120
ILNFPELADQ FPRPASNSPR DVQAAAAKAA SMEIPTPPAS SSSSSSSSLC PSTPEELSEI  180
VQLPSLGTSY ETAELGNEFV FVDSVEGWLY SYPWYQRVNN NADEEQSHGF FKDQISTDSI  240
TPPSSTFEAF LWQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-64ERF family protein