PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516314.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 317aa    MW: 34552.7 Da    PI: 7.7086
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.39.8e-15104148347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + +q G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_023516314.1 104 PWTEEEHKLFLVGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKY 148
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MIMRSTAAVV NESPAAETCG GGPGEIMLFG VRVVVDSMRK SVSLNNLSQY EQPHEVADVI  60
TNDSKNDLVS VNNKDDVAAG YASADDAVPN ARGNRERERK RGVPWTEEEH KLFLVGLQQV  120
GKGDWRGISR NFVKTRTPTQ VASHAQKYFL RRSNLNRRRR RSSLFDITTD TVTAAPMVEE  180
PAQRQEIASQ SHSFIPSPPP EISKHNVIPV EHTLPFSFGP APLATTLTKN LMEKCGPGEV  240
NTESDGSLKL GLKDSIFPSN QNPTSTGLNL NSNPAMESSA LSLRLSLTSD QREASSRHPT  300
FQAMPSFNNG EGIISAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.22e-60MYB_related family protein