PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516316.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 260aa    MW: 29631.4 Da    PI: 9.2618
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.62.6e-35251172103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+ye++ed+++++++sw ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgFkk+  e+         weF +++Fkkg+k+ll  
  XP_023516316.1  25 FLAKTYELVEDAATDHIVSWGHSHTTFVVWRPPEFATHILPNYFKHNNFSSFVRQLNTYGFKKIVAER---------WEFGNENFKKGEKQLLLG 110
                     9*********************99*****************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+ks+
  XP_023516316.1 111 IQRRKSH 117
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEEMIGNYSV GFCSAESEKA NPAPFLAKTY ELVEDAATDH IVSWGHSHTT FVVWRPPEFA  60
THILPNYFKH NNFSSFVRQL NTYGFKKIVA ERWEFGNENF KKGEKQLLLG IQRRKSHNHN  120
NNLHQHQQIP FQFCYTTAAA TTTTTSSSSS DPDILAALTQ DNRRLRRRNH MLLSELTQMK  180
NLYSDIIYFI QNHVKPLEHK YGRSVPKLVD LKPPPPPPPP QTEAGVEEGN GSVKLFGVPI  240
RGKKRVHHEE GELQMSSHGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.16e-63HSF family protein