PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516652.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 255aa    MW: 27662.7 Da    PI: 10.5058
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.81.7e-19119152134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_023516652.1 119 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 152
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSHLLTPRPS SPSPLRPILP PSLPSALSSA MAPPYHDDLL RRSSSHHLSS SSSSLSFPAP  60
DHSNSDDPRR LQLKHESESS SCCENHNTHN DLMIHGARNS HDLNRTTMLN DGAAIIRTCS  120
DCNTTKTPLW RSGPRGPKSL CNACGIRQRK ARRAMAEAAA VNGGIPCGGK SAAIILKTNK  180
TVQHKIMTKP AAKKLKRKRK DDVVVAGGGK KGCFEDIKIG RRLSEISSSY RRVFPQDETD  240
AAILLMTLSY GLLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.19e-18GATA family protein