PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516752.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Nin-like
Protein Properties Length: 310aa    MW: 35077.3 Da    PI: 4.6629
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.11.3e-26138188252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +k++s e +s+yF++pi++AAk+L+v+lT+LK++CR++GI+RWPhRk+ sl
  XP_023516752.1 138 TKTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCRELGIRRWPHRKLMSL 188
                     799*********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGATWRPKCE AMAFEDPFPL SCHLSPLHCR TDNYSALDWN CNFGFPDSFF DVVPLLESCT  60
NNDSFFDPKD IDPISSFISE DGGVGIWSEL ESEAFGVEEG GGENGNGGMG NEGTMMRKAK  120
RKCCRETSNG SGSGSASTKT LSREAISEYF YMPITQAAKQ LNVGLTLLKK RCRELGIRRW  180
PHRKLMSLQT LIKNVKELQK EDGDQGVNKL SNVLKILENE KKLMEERPDL QLEDNTKRLR  240
QACFKANYKK RKLSGTNNGS QYFSINGGMI CRDDQEQGEE EEDDDEDDEE IKYLLMEPFY  300
ANNINVKFES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.17e-52Nin-like family protein