PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516760.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 205aa    MW: 22322.6 Da    PI: 4.5862
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.8e-192272155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+ykGVr++k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  XP_023516760.1 22 SRYKGVRRRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 72
                    79*****998.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MTKPPSPSTA SAASAAADSP DSRYKGVRRR KWGKWVSEIR LPNSRERIWL GSYDSAEKAA  60
RAFDAALFCL RGRTARFNFP NNPPEIAGAS LLSRAEIQSV AAQFANSNPL PPPSSECTQP  120
TIGSPSPSPS PSVVSETTTA VIEERSTFLD LSTAMGSGNY GSEFGLFPEY NPFFNELMNT  180
TNSGAPFFDY GDENLDDQDS FLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12531KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.14e-56ERF family protein