PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516838.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 133aa    MW: 14669.4 Da    PI: 10.164
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.2e-2153102255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  XP_023516838.1  53 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAALAYDEAALRFKG 102
                     7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MVSALAQVIT SGSGSGSSRS PVEADYWPQS QQAAADEKQG GGSRTGMVSR ERHYRGVRQR  60
PWGKWAAEIR DPKKAARVWL GTFDTAEAAA LAYDEAALRF KGTKAKLNFP ERLTTPCPPP  120
PYAYHHHHNN HNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.16e-31ERF family protein