PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023516925.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 217aa MW: 24211.2 Da PI: 7.0157

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023516925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	107.9	1.2e-33	4	129	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrF+Pt+eelv eyLk kv + +l++ ++i+e+ +++++Pwd+p + ++++y Fsk+++ +r+ r sgyWka+g++++++ XP_023516925.1 4 LPPGFRFEPTEEELVFEYLKCKVFSFPLPA-SIIPEIttSVCNLDPWDIPGG-GNWQEDTYLFSKNQEC----DRRVRWSPSGYWKAKGSERKIV 92 79*************************9.789988667******43.3456789998775....48899999************* PP NAM 94 skkgel...vglkktLvfykgrapkgektdWvmheyrl 128 s+++ + vg++ktLvf+ g++++ +kt Wvmheyrl XP_023516925.1 93 SSSSDAvglVGMRKTLVFWMGSSSS-RKTGWVMHEYRL 129 844435559******998877.8*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MRGLPPGFRF EPTEEELVFE YLKCKVFSFP LPASIIPEIT TSVCNLDPWD IPGGGNWQED 60 TYLFSKNQEC DRRVRWSPSG YWKAKGSERK IVSSSSDAVG LVGMRKTLVF WMGSSSSRKT 120 GWVMHEYRLL LSPSQTPTPP SVVINNMEKW VVCRIFCNNS GIKNDLHFHP LQYPVSASTN 180 DDTNALSDDS VSSTASSSSF SATTTMPFPN HHSSASN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	2e-38	NAC family protein